3,602 research outputs found

    Sleep and inflammation in resilient aging.

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    Sleep quality is important to health, and increasingly viewed as critical in promoting successful, resilient aging. In this review, the interplay between sleep and mental and physical health is considered with a focus on the role of inflammation as a biological pathway that translates the effects of sleep on risk of depression, pain and chronic disease risk in aging. Given that sleep regulates inflammatory biologic mechanisms with effects on mental and physical health outcomes, the potential of interventions that target sleep to reduce inflammation and promote health in aging is also discussed

    The Optical Velocity of the Antlia Dwarf Galaxy

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    We present the results of a VLT observing program carried out in service mode using FORS1 on ANTU in Long Slit mode to determine the optical velocities of nearby low surface brightness galaxies. Outlying Local Group galaxies are of paramount importance in placing constraints the dynamics and thus on both the age and the total mass of the Local Group. Optical velocities are also necessary to determine if the observations of HI gas in and around these systems are the result of gas associated with these galaxies or a chance superposition with high velocity HI clouds or the Magellanic Stream. The data were of sufficient signal-to-noise to obtain a reliable result in one of the galaxies we observed - Antlia - for which we have found an optical helio-centric radial velocity of 351 Ā±\pm 15 km/s.Comment: 11 pages, 4 figures, 5 tables MNRAS, in pres

    Galactic Halo substructure in the Sloan Digital Sky Survey: the ancient tidal stream from the Sagittarius dwarf galaxy

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    Two studies have recently reported the discovery of pronounced Halo substructure in the Sloan Digital Sky Survey (SDSS) commissioning data. Here we show that this Halo substructure is almost in its entirety due to the expected tidal stream torn off the Sagittarius dwarf galaxy during the course of its many close encounters with the Milky Way. This interpretation makes strong predictions on the kinematics and distances of these stream stars. Comparison of the structure in old horizontal branch stars, detected by the SDSS team, with the carbon star structure discovered in our own survey, indicates that this halo stream is of comparable age to the Milky Way. It would appear that the Milky Way and the Sagittarius dwarf galaxy have been a strongly interacting system for most of their existence. Once complete, the SDSS will provide a unique dataset with which to constrain the dynamical evolution of the Sagittarius dwarf galaxy, it will also strongly constrain the mass distribution of the outer Milky Way.Comment: 7 pages, 3 figures (1 color figure chunky due to PS compression), minor revisions,accepted by ApJ

    MOLECULAR ARCHITECTURE OF ROD PHOTORECEPTOR PHOSPHODIESTERASE IN ITS NONACTIVATED AND G-PROTEIN ACTIVATED STATES

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    The photoreceptor phosphodiesterase (PDE6) plays an important role in the G-protein coupled visual signaling pathway which uses cGMP as a second messenger to convert light stimuli into electrical signals. PDE6 is a tetrameric peripheral membrane protein consisting of two catalytic subunits and two inhibitory subunits and is localized to the outer segment membranes of rod and cone photoreceptors. Mutations in this enzyme are one cause of retinitis pigmentosa and other retinal degenerative diseases resulting in blindness or visual dysfunction that lack adequate therapeutic intervention due to inadequate knowledge of PDE6 structure and regulation PDE6 is tightly regulated in the nonactivated state, as well as during activation and deactivation of the visual signaling pathway. In the nonactivated state, the rod PDE6 catalytic dimer (consisting of the PĪ± and PĪ² catalytic subunits) is inhibited by a pair of identical inhibitory subunits (PĪ³) to form the PDE6 holoenzyme (PĪ±Ī²Ī³Ī³). Activation of PDE6 results from displacement of the PĪ³ subunit by the light-activated G protein alpha-subunit (GtĪ±). Deactivation of PDE6 is the result of the GTPase activity of GtĪ± which is aided by a GTPase accelerating complex consisting of the Regulator of G Protein Signaling 9 (RGS9-1), the obligate dimer to RGS9-1, GĪ²5L, and the RGS9-1 anchoring protein (R9AP). Together this inactivation complex allows PDE6 to return to the nonactivated conformation. The hypotheses of my research are: (1) silica particles encased by large unilamellar phospholipid vesicles will mimic the photoreceptor membrane and provide a surface suitable for enhancing the interactions of PDE6 and GtĪ± as well as the proteins involved in the deactivation complex; (2) one GtĪ± molecule binds to each PDE6 catalytic domain and induces a large conformational change in the inhibitory PĪ³ subunit; (3) interaction of RGS9-1 with GtĪ± will induce changes in the interaction surface between activated GtĪ± and PDE6, allowing PĪ³ to resume the conformation which inhibits PDE6 activity. The first aim of my research is to establish a methodology to study PDE6 and its associated complexes in a system that mimics the rod outer segment. In order to achieve this, a protocol for encasing silica particles in large unilamellar phospholipid vesicles (called ā€œlipobeadsā€) was developed. This methodology not only allowed for an increase in the extent of GtĪ± activation when compared to PDE6 in solution, but also allowed for study of membrane-attached PDE6 and GtĪ± at concentrations that more closely mimic those observed in the rod outer segment. The second aim of my research is to characterize the structure of membrane-attached PDE6 in its nonactivated state and in the fully activated state upon binding of GtĪ±. This was achieved using chemical crosslinking and mass spectrometry in conjunction with a computational modeling program called the Integrative Modelling Platform. In the nonactivated state, it was observed the PĪ³ has significant interaction with the regulatory GAFa domain as well as the catalytic domain of PĪ±Ī² while displaying a less well defined structure in the central cationic region of PĪ³. Upon activation, two GtĪ± are bound to specific docking sites on PDE6 resulting in the displacement of PĪ³ from both catalytic domains as well as a predicted shift of PĪ³ away from GAFa. The third aim of my research is to understand the sequential activation mechanism of PDE6 by GtĪ±. Chemical crosslinking and mass spectrometry was again used in order to characterize the structures of PDE6 with a sub-stoichiometric amount of GtĪ± as well as a slight stoichiometric excess of GtĪ± (0.4:1 and 3:1 GtĪ±:PDE6, respectively). In the case of the stoichiometric excess, a high molecular weight cross-linked band on SDS-PAGE indicative of two GtĪ± bound to PDE6 was structurally analyzed; the sub-stoichiometric condition resulted in a single GtĪ± bound species which was also analyzed. Comparisons were also made between the inactive (GtĪ±-GDP) and activated (GtĪ±*-GDP-AlF4-) states. This work showed that when two activated GtĪ±* molecules were bound to PDE6 both GtĪ± subunits were associated with the catalytic domains of PDE6. When GtĪ± was present at sub-stoichiometric levels relative to PDE6, a single docking site was identified in proximity to the GAFb domains of PDE6. The inactive state of GtĪ± (GtĪ±-GDP) also was capable of binding PDE6 but bound only to the GAFb domains. Measurements of PDE catalytic activity established two GtĪ±-GDP-AlF4- molecules were able to produce significant activation of PDE6, whereas the sub-stoichiometric condition (0.4 GtĪ± per PDE6) did not produce activity above basal levels. These results indicate that the binding of a single GtĪ± is not sufficient to stimulate activity of PDE6. The final aim of my research is to establish a methodology for the study of the deactivation complex of PDE6. To achieve this aim, lipobeads were used in order to anchor the integral membrane protein R9AP to produce ā€œproteolipobeadsā€. This membrane-embedded R9AP preparation was then able to bind the RGS9-1/GĪ²5L without affecting the ability of PDE6 and GtĪ± to also bind to the proteolipobeads. Chemical crosslinking and mass spectrometry analysis confirmed that all of the proteins were present on the membrane and in close enough proximity to allow future analysis of the PDE6 inactivation complex

    MOLECULAR ARCHITECTURE OF ROD PHOTORECEPTOR PHOSPHODIESTERASE IN ITS NONACTIVATED AND G-PROTEIN ACTIVATED STATES

    Get PDF
    The photoreceptor phosphodiesterase (PDE6) plays an important role in the G-protein coupled visual signaling pathway which uses cGMP as a second messenger to convert light stimuli into electrical signals. PDE6 is a tetrameric peripheral membrane protein consisting of two catalytic subunits and two inhibitory subunits and is localized to the outer segment membranes of rod and cone photoreceptors. Mutations in this enzyme are one cause of retinitis pigmentosa and other retinal degenerative diseases resulting in blindness or visual dysfunction that lack adequate therapeutic intervention due to inadequate knowledge of PDE6 structure and regulation PDE6 is tightly regulated in the nonactivated state, as well as during activation and deactivation of the visual signaling pathway. In the nonactivated state, the rod PDE6 catalytic dimer (consisting of the PĪ± and PĪ² catalytic subunits) is inhibited by a pair of identical inhibitory subunits (PĪ³) to form the PDE6 holoenzyme (PĪ±Ī²Ī³Ī³). Activation of PDE6 results from displacement of the PĪ³ subunit by the light-activated G protein alpha-subunit (GtĪ±). Deactivation of PDE6 is the result of the GTPase activity of GtĪ± which is aided by a GTPase accelerating complex consisting of the Regulator of G Protein Signaling 9 (RGS9-1), the obligate dimer to RGS9-1, GĪ²5L, and the RGS9-1 anchoring protein (R9AP). Together this inactivation complex allows PDE6 to return to the nonactivated conformation. The hypotheses of my research are: (1) silica particles encased by large unilamellar phospholipid vesicles will mimic the photoreceptor membrane and provide a surface suitable for enhancing the interactions of PDE6 and GtĪ± as well as the proteins involved in the deactivation complex; (2) one GtĪ± molecule binds to each PDE6 catalytic domain and induces a large conformational change in the inhibitory PĪ³ subunit; (3) interaction of RGS9-1 with GtĪ± will induce changes in the interaction surface between activated GtĪ± and PDE6, allowing PĪ³ to resume the conformation which inhibits PDE6 activity. The first aim of my research is to establish a methodology to study PDE6 and its associated complexes in a system that mimics the rod outer segment. In order to achieve this, a protocol for encasing silica particles in large unilamellar phospholipid vesicles (called ā€œlipobeadsā€) was developed. This methodology not only allowed for an increase in the extent of GtĪ± activation when compared to PDE6 in solution, but also allowed for study of membrane-attached PDE6 and GtĪ± at concentrations that more closely mimic those observed in the rod outer segment. The second aim of my research is to characterize the structure of membrane-attached PDE6 in its nonactivated state and in the fully activated state upon binding of GtĪ±. This was achieved using chemical crosslinking and mass spectrometry in conjunction with a computational modeling program called the Integrative Modelling Platform. In the nonactivated state, it was observed the PĪ³ has significant interaction with the regulatory GAFa domain as well as the catalytic domain of PĪ±Ī² while displaying a less well defined structure in the central cationic region of PĪ³. Upon activation, two GtĪ± are bound to specific docking sites on PDE6 resulting in the displacement of PĪ³ from both catalytic domains as well as a predicted shift of PĪ³ away from GAFa. The third aim of my research is to understand the sequential activation mechanism of PDE6 by GtĪ±. Chemical crosslinking and mass spectrometry was again used in order to characterize the structures of PDE6 with a sub-stoichiometric amount of GtĪ± as well as a slight stoichiometric excess of GtĪ± (0.4:1 and 3:1 GtĪ±:PDE6, respectively). In the case of the stoichiometric excess, a high molecular weight cross-linked band on SDS-PAGE indicative of two GtĪ± bound to PDE6 was structurally analyzed; the sub-stoichiometric condition resulted in a single GtĪ± bound species which was also analyzed. Comparisons were also made between the inactive (GtĪ±-GDP) and activated (GtĪ±*-GDP-AlF4-) states. This work showed that when two activated GtĪ±* molecules were bound to PDE6 both GtĪ± subunits were associated with the catalytic domains of PDE6. When GtĪ± was present at sub-stoichiometric levels relative to PDE6, a single docking site was identified in proximity to the GAFb domains of PDE6. The inactive state of GtĪ± (GtĪ±-GDP) also was capable of binding PDE6 but bound only to the GAFb domains. Measurements of PDE catalytic activity established two GtĪ±-GDP-AlF4- molecules were able to produce significant activation of PDE6, whereas the sub-stoichiometric condition (0.4 GtĪ± per PDE6) did not produce activity above basal levels. These results indicate that the binding of a single GtĪ± is not sufficient to stimulate activity of PDE6. The final aim of my research is to establish a methodology for the study of the deactivation complex of PDE6. To achieve this aim, lipobeads were used in order to anchor the integral membrane protein R9AP to produce ā€œproteolipobeadsā€. This membrane-embedded R9AP preparation was then able to bind the RGS9-1/GĪ²5L without affecting the ability of PDE6 and GtĪ± to also bind to the proteolipobeads. Chemical crosslinking and mass spectrometry analysis confirmed that all of the proteins were present on the membrane and in close enough proximity to allow future analysis of the PDE6 inactivation complex
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